Package: TFisher 0.2.0

TFisher: Optimal Thresholding Fisher's P-Value Combination Method

We provide the cumulative distribution function (CDF), quantile, and statistical power calculator for a collection of thresholding Fisher's p-value combination methods, including Fisher's p-value combination method, truncated product method and, in particular, soft-thresholding Fisher's p-value combination method which is proven to be optimal in some context of signal detection. The p-value calculator for the omnibus version of these tests are also included. For reference, please see Hong Zhang and Zheyang Wu. "TFisher Tests: Optimal and Adaptive Thresholding for Combining p-Values", submitted.

Authors:Hong Zhang and Zheyang Wu

TFisher_0.2.0.tar.gz
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TFisher_0.2.0.tgz(r-4.4-any)TFisher_0.2.0.tgz(r-4.3-any)
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TFisher.pdf |TFisher.html✨
TFisher/json (API)

# Install 'TFisher' in R:
install.packages('TFisher', repos = c('https://wpihongzhang.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

3.34 score 15 packages 18 scripts 2.7k downloads 18 exports 11 dependencies

Last updated 7 years agofrom:c9a1d8fdd7. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 18 2024
R-4.5-winOKNov 18 2024
R-4.5-linuxOKNov 18 2024
R-4.4-winOKNov 18 2024
R-4.4-macOKNov 18 2024
R-4.3-winOKNov 18 2024
R-4.3-macOKNov 18 2024

Exports:p.softp.soft.omnip.tfisherp.tfisher.omnip.tpmp.tpm.omnipower.softpower.tfisherpower.tpmq.softq.tfisherq.tpmstat.softstat.soft.omnistat.tfisherstat.tfisher.omnistat.tpmstat.tpm.omni

Dependencies:latticeMASSMatrixMatrixModelsmnormtmvtnormnumDerivquantregsnSparseMsurvival

Readme and manuals

Help Manual

Help pageTopics
CDF of soft-thresholding Fisher's p-value combination statistic under the null hypothesis.p.soft
CDF of omnibus soft-thresholding Fisher's p-value combination statistic under the null hypothesis.p.soft.omni
CDF of thresholding Fisher's p-value combination statistic under the null hypothesis.p.tfisher
CDF of omnibus thresholding Fisher's p-value combination statistic under the null hypothesis.p.tfisher.omni
CDF of truncated product method statistic under the null hypothesis.p.tpm
CDF of omnibus truncated product method statistic under the null hypothesis.p.tpm.omni
Statistical power of soft-thresholding Fisher's p-value combination test under Gaussian mixture model.power.soft
Statistical power of thresholding Fisher's p-value combination test under Gaussian mixture model.power.tfisher
Statistical power of truncated product method test under Gaussian mixture model.power.tpm
Quantile of soft-thresholding Fisher's p-value combination statistic under the null hypothesis.q.soft
Quantile of thresholding Fisher's p-value combination statistic under the null hypothesis.q.tfisher
Quantile of truncated product method statistic under the null hypothesis.q.tpm
Construct soft-thresholding Fisher's p-value combination statistic.stat.soft
Construct omnibus soft-thresholding Fisher's p-value combination statistic.stat.soft.omni
Construct thresholding Fisher's p-value combination statistic.stat.tfisher
Construct omnibus thresholding Fisher's (TFisher) p-value combination statistic.stat.tfisher.omni
Construct truncated product method statistic.stat.tpm
Construct omnibus truncated product method statistic.stat.tpm.omni